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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915055.1_cds_XP_016464976.1_57965
CDS Infomation

[gene=LOC107787876] [db_xref=GeneID:107787876] [protein=mitogen-activated protein kinase kinase kinase NPK1-like] [protein_id=XP_016464976.1] [location=join(46172..46471,46609..46650,47195..47260,47335..47445,47536..47616,47690..47767,47852..47934,50263..50344,50459..50559,50905..50944,51033..51092,51170..51219,51901..52099,52188..52415,52514..52827,52909..52976,54444..54547)] [gbkey=CDS]
Sequence

ATGCAAGATATTTTTGGATCAGTTCGGCGATCACTGGTGTTCCGAACACCGACTGCCGAC
GGTGGAGATGACGGTAATCTAGTTGAGAAGATCAATTCCTGCATCCGGAACTCCAGAGTT
TTCTCTAAGCTGTCGCCTCCTCCGCCGGCGTTGCCCTCACCAAAAGCCGTTAAAGATGGA
GGTGATGCGGCTCCGCGGCCTATCCGGTGGAGAAAAGGTGAGATGATTGGATGTGGCGCT
TTTGGACAGGTTTATATGGGAATGAATCTCGATTCTGGTGAACTTCTCGCCGTCAAGCAG
GTTTTGATAGCTGCGAACAGTGCTTCAAAGGAGAAAGCTCAGTCCCACGTTAAAGAGCTT
GAGGAGGAAGTCAAGCTTCTCAAGAATCTCTCGCATCCACATATTGTTAGATATCTTGGA
ACTGTGAGAGAAGAAGACACATTGAATATTCTGCTGGAATTTGTACCTGGTGGATCGATA
TCATCCCTTTTAGGCAAATTTGGATCTTTCCCCGAGCCAGTTATAAGAACGTACACTAAG
CAATTGCTCCTAGGGCTGGATTATCTTCACAAGAATGGAATCATGCATAGAGATATTAAG
GGGGCCAATATCCTTGTTGATAACAAAGGTTGCATAAAACTGGCTGACTTTGGGGCATCA
AAGAAGGTTGTCGAACTGGCTACTATATCAGGCGCCAAGTCCATGAAGGGCACACCATAC
TGGATGGCTCCTGAGGTCATTCGCCAAACCGGTCATAGCTTCTCTGCTGATATATGGAGT
GTAGGATGTACTGTAATAGAGATGACTACTGGCAAGCCACCCTGGAGCCAACAGTATCAA
GAGGTTGCTGCGCTCTTCTATATTGGGACAACAAAAGCTCATCCTCCAATCCCTGAACAT
CTGTCTGTTGAAGCAAAGGACTTTCTGCTGAAATGTTTACAAAAGGAACCAGAGTTAAGA
CTATCAGCTAGTGAGTTGTTACAGCATCCATTTGTCACTGGTGAAGCACAACTATCTTCT
CCTGACGGTTCTAGTTCCATGATGGGCAAATCTCAAGCTCATTCTGATTCAAATGGGCAT
AACAGAAAAAGCGTTGTTGGTTCGATAGACACCTGCAACTTGGGTACCTTGAATATCTCA
ACAGAAAATGCATGTACCTTGTCGGAGACTGGACATATGTGGAGAGGAAACAATAGTGAT
GATGATATGTGTCAGATTGATGATACTGATAATTTTTTCTCGGGTGGAGGAACAAAGTTA
AGCACTGCTAAGACGGTGGATGACTTCAATAAGAGTTTCAATCCTATATCAGAGCCCGCT
GATGATTGGAACTGTGATTATGGCATGACTCCTCAATCACAACAAGGGAATGCAAATATA
GTTAACAATCAGGAAGGTGGCATAGGCGATGGGATTTCAGTCTCGCCTAACAACAATTCT
GCAGTTTTTTGTGGTCCTTCCATATCAGAAGACGAGGATGAGCTTACTGAGTCTAAAATC
AGAGCCTTCCTGGATGAAAAGGCTCTTGAATTGAAGAAACTGCAGACACCTCTGTATGAA
GAGTACTACAACAACAGTTTGAATCCTTCATACTCTCCACAGTTGGCTGAGACTGCAATT
GATGAAACCACTCCAAAATACTTGAAATTACCCCCAAAAAGTAGGTCACCAAGTAGGGGT
CCTATTGGAAGCCCGTCTACAGGAGTTGATATCATCAATAGTGCAAGTCCCGGGAGCAGC
AACAGGCGAACATCATGCATTGGCAGTGGAAGCAACCAAGACTATGATGACAGTTCACCG
CAATCTAATGAGCGGAGGCAATCAAATAGTCCAATTGCAAGTTTTAGTGAGATTCAGAGG
AAGTGGAAGGAAGAGCTTGACCAAGAGCTTGAAAGAAAGCGAGAAATGATGCGTCAAGCA
GGTGTGGGGGGGAAAACATCTTCTCCCAAGGATCGAGCTTTGAATCGACAGAGAGAGCGT
TCAAGGTTTGCATCTCCAGGAAAATGA

Peptide Sequence

PEP ID

XP_016464976.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Nicotiana tabacum]
Sequence

MQDIFGSVRRSLVFRTPTADGGDDGNLVEKINSCIRNSRVFSKLSPPPPALPSPKAVKDG
GDAAPRPIRWRKGEMIGCGAFGQVYMGMNLDSGELLAVKQVLIAANSASKEKAQSHVKEL
EEEVKLLKNLSHPHIVRYLGTVREEDTLNILLEFVPGGSISSLLGKFGSFPEPVIRTYTK
QLLLGLDYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKKVVELATISGAKSMKGTPY
WMAPEVIRQTGHSFSADIWSVGCTVIEMTTGKPPWSQQYQEVAALFYIGTTKAHPPIPEH
LSVEAKDFLLKCLQKEPELRLSASELLQHPFVTGEAQLSSPDGSSSMMGKSQAHSDSNGH
NRKSVVGSIDTCNLGTLNISTENACTLSETGHMWRGNNSDDDMCQIDDTDNFFSGGGTKL
STAKTVDDFNKSFNPISEPADDWNCDYGMTPQSQQGNANIVNNQEGGIGDGISVSPNNNS
AVFCGPSISEDEDELTESKIRAFLDEKALELKKLQTPLYEEYYNNSLNPSYSPQLAETAI
DETTPKYLKLPPKSRSPSRGPIGSPSTGVDIINSASPGSSNRRTSCIGSGSNQDYDDSSP
QSNERRQSNSPIASFSEIQRKWKEELDQELERKREMMRQAGVGGKTSSPKDRALNRQRER
SRFASPGK

Transcript Sequence

Gene sequence data has not been registered.